Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PrkdcP97313 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm8599-201ENSMUST00000193033 457 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC3.61□□□□□ -1.83
PrkdcP97313 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 AC123705.3-201ENSMUST00000223531 2069 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm22326-201ENSMUST00000158897 351 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm22119-201ENSMUST00000175594 99 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm8719-201ENSMUST00000203602 534 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.6□□□□□ -1.83
PrkdcP97313 AC125405.1-201ENSMUST00000226406 589 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm42551-201ENSMUST00000197701 1573 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm36947-201ENSMUST00000194709 2249 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC3.6□□□□□ -1.83
PrkdcP97313 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
PrkdcP97313 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm23014-201ENSMUST00000104144 130 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm23485-201ENSMUST00000104181 155 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm29576-201ENSMUST00000188020 678 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm28354-201ENSMUST00000190904 678 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.6□□□□□ -1.83
PrkdcP97313 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PrkdcP97313 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PrkdcP97313 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
PrkdcP97313 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm20796-201ENSMUST00000180355 5838 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm11679-201ENSMUST00000121830 779 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm13214-201ENSMUST00000122137 408 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Mir6412-201ENSMUST00000184477 97 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm29138-201ENSMUST00000191444 348 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gm37961-201ENSMUST00000192729 299 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PrkdcP97313 Gm42676-201ENSMUST00000197609 2686 ntBASIC3.6□□□□□ -1.83
PrkdcP97313 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PrkdcP97313 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms