Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Cux1P53564 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
Cux1P53564 Gm37174-201ENSMUST00000194699 3058 ntBASIC8.3□□□□□ -1.08
Cux1P53564 AC152944.1-201ENSMUST00000220160 3101 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cux1P53564 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cux1P53564 Gm8853-201ENSMUST00000198366 1344 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Gm5285-201ENSMUST00000193089 666 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Trbv9-201ENSMUST00000194494 290 ntBASIC8.29□□□□□ -1.08
Cux1P53564 BX530055.1-201ENSMUST00000197285 122 ntBASIC8.29□□□□□ -1.08
Cux1P53564 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Gm18791-201ENSMUST00000204611 726 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC8.29□□□□□ -1.08
Cux1P53564 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cux1P53564 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cux1P53564 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Gm42798-201ENSMUST00000200853 3972 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Cux1P53564 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cux1P53564 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Cux1P53564 Gm24186-201ENSMUST00000157983 127 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC8.29□□□□□ -1.08
Cux1P53564 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.29□□□□□ -1.08
Cux1P53564 Gm37445-201ENSMUST00000195318 242 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Gm37973-201ENSMUST00000195767 1289 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Gm7040-201ENSMUST00000223271 443 ntBASIC8.29□□□□□ -1.08
Cux1P53564 CT030238.1-201ENSMUST00000228393 442 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Cux1P53564 Gm23626-201ENSMUST00000082458 133 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Gm22456-201ENSMUST00000082578 125 ntBASIC8.29□□□□□ -1.08
Cux1P53564 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cux1P53564 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Cux1P53564 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Gm37551-201ENSMUST00000195556 2861 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Cux1P53564 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Gm37205-201ENSMUST00000194820 2736 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Gm24117-201ENSMUST00000103973 133 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Gm14995-201ENSMUST00000117135 391 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC8.28□□□□□ -1.08
Cux1P53564 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.28□□□□□ -1.08
Cux1P53564 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Gm27551-201ENSMUST00000184258 77 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Gm6717-201ENSMUST00000185549 838 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Cux1P53564 Prl7a1-203ENSMUST00000224852 1283 ntBASIC8.28□□□□□ -1.08
Cux1P53564 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Gm22826-201ENSMUST00000083774 165 ntBASIC8.28□□□□□ -1.08
Cux1P53564 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Cux1P53564 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cux1P53564 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.28□□□□□ -1.08
Cux1P53564 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Cux1P53564 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.08
Cux1P53564 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Cux1P53564 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Cux1P53564 Gm15583-201ENSMUST00000116191 3510 ntBASIC8.27□□□□□ -1.08
Cux1P53564 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Cux1P53564 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Cux1P53564 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC8.27□□□□□ -1.09
Cux1P53564 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Cux1P53564 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Cux1P53564 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Cux1P53564 Gm37621-201ENSMUST00000194716 5531 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Cux1P53564 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Cux1P53564 Gm24578-201ENSMUST00000103970 129 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Gm23879-201ENSMUST00000116874 126 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Gm13363-201ENSMUST00000122008 522 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Gm25534-201ENSMUST00000175365 125 ntBASIC8.27□□□□□ -1.09
Cux1P53564 S100a11-ps-201ENSMUST00000181735 306 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Gm42720-201ENSMUST00000196813 300 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Gm9512-201ENSMUST00000223112 497 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Cux1P53564 CT025556.1-201ENSMUST00000222965 1884 ntBASIC8.27□□□□□ -1.09
Cux1P53564 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Cux1P53564 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Cux1P53564 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Cux1P53564 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Cux1P53564 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm19035-201ENSMUST00000193299 1742 ntBASIC8.26□□□□□ -1.09
Cux1P53564 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Cux1P53564 Gm26814-201ENSMUST00000181178 4149 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms