Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC115289.2-201ENSMUST00000223836 2803 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm23485-201ENSMUST00000104181 155 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Gm14125-202ENSMUST00000120921 756 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Col18a1P39061 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm28594-201ENSMUST00000187022 661 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm37543-201ENSMUST00000192443 1031 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 AC138284.2-201ENSMUST00000213982 567 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 AC125190.2-201ENSMUST00000221160 497 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 AC158142.3-201ENSMUST00000226230 675 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm15500-201ENSMUST00000071523 894 ntBASIC7.59□□□□□ -1.2
Col18a1P39061 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Col18a1P39061 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Col18a1P39061 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm12387-201ENSMUST00000118573 955 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Gm12731-201ENSMUST00000120932 268 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm23534-201ENSMUST00000157539 97 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Gm24188-201ENSMUST00000157980 108 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm9687-201ENSMUST00000189312 602 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm44673-201ENSMUST00000205692 996 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 CR974592.1-201ENSMUST00000220422 574 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 CT010486.1-201ENSMUST00000224609 422 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 CT009550.5-201ENSMUST00000226286 382 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 AC132833.3-201ENSMUST00000227472 866 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col18a1P39061 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col18a1P39061 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.58□□□□□ -1.2
Col18a1P39061 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col18a1P39061 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col18a1P39061 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 AC117608.2-201ENSMUST00000224124 1363 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm16129-201ENSMUST00000152628 486 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm22411-201ENSMUST00000175462 126 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Gm22002-201ENSMUST00000175622 125 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
Col18a1P39061 Mir6410-201ENSMUST00000184204 104 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 Trav3-2-201ENSMUST00000198999 305 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Gm44580-201ENSMUST00000206333 877 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 AL935138.1-201ENSMUST00000215309 196 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm6863-201ENSMUST00000052882 636 ntBASIC7.57□□□□□ -1.2
Col18a1P39061 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
Col18a1P39061 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms