Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm22992-201ENSMUST00000179496 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm25892-201ENSMUST00000179867 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm24092-201ENSMUST00000180257 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm26923-201ENSMUST00000182615 996 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm27960-201ENSMUST00000183445 184 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Mir7235-201ENSMUST00000183796 56 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm37376-201ENSMUST00000192176 453 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm36638-201ENSMUST00000193295 400 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm2147-201ENSMUST00000193588 639 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm37659-201ENSMUST00000194574 111 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm38360-201ENSMUST00000195130 454 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm44837-201ENSMUST00000206863 717 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC4.61□□□□□ -1.67
Cdx1P18111 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm7117-201ENSMUST00000071515 387 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm25134-201ENSMUST00000082646 160 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Cdx1P18111 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cdx1P18111 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Cdx1P18111 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.6□□□□□ -1.67
Cdx1P18111 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm13321-201ENSMUST00000117101 400 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm13193-201ENSMUST00000117275 225 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm15016-201ENSMUST00000117300 720 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm16511-201ENSMUST00000120019 564 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm23995-201ENSMUST00000158060 129 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm16557-201ENSMUST00000159182 191 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm20778-201ENSMUST00000178524 627 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm5947-201ENSMUST00000179156 714 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm5645-201ENSMUST00000179597 714 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.6□□□□□ -1.67
Cdx1P18111 Mir6971-201ENSMUST00000183497 63 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Mir7220-201ENSMUST00000183978 60 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Mir6361-201ENSMUST00000185079 101 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm28934-201ENSMUST00000186491 346 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm28974-201ENSMUST00000187893 231 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm37072-201ENSMUST00000194570 837 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Gm8930-201ENSMUST00000201693 768 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC4.6□□□□□ -1.67
Cdx1P18111 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 AC167222.2-201ENSMUST00000220014 295 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC4.6□□□□□ -1.67
Cdx1P18111 AC155941.1-201ENSMUST00000220223 529 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 AC164426.1-201ENSMUST00000225745 929 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cdx1P18111 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cdx1P18111 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cdx1P18111 Olfr467-201ENSMUST00000084756 927 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 AC123629.1-201ENSMUST00000225669 1364 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms