| Hoxa3 | P02831 | Gm23739-201 | ENSMUST00000102295 | 108 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav6-6-201 | ENSMUST00000103584 | 344 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav12n-1-201 | ENSMUST00000103587 | 344 nt | APPRIS ALT2 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav6n-5-201 | ENSMUST00000103611 | 338 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Lrrc51-205 | ENSMUST00000106965 | 743 nt | TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Lrrc51-207 | ENSMUST00000106967 | 675 nt | TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Prl2c2-201 | ENSMUST00000110594 | 842 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Ncald-202 | ENSMUST00000116445 | 858 nt | APPRIS P1 TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm13114-201 | ENSMUST00000117605 | 106 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm14294-201 | ENSMUST00000119749 | 751 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm4914-201 | ENSMUST00000119757 | 459 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Fyttd1-202 | ENSMUST00000120345 | 648 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm16200-201 | ENSMUST00000120385 | 331 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm12041-201 | ENSMUST00000121606 | 602 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm11787-201 | ENSMUST00000121996 | 1050 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm8080-201 | ENSMUST00000122046 | 1155 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Prl2c5-202 | ENSMUST00000126540 | 971 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm4764-201 | ENSMUST00000130207 | 1233 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm15218-201 | ENSMUST00000131006 | 618 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm16347-201 | ENSMUST00000131707 | 622 nt | TSL 2 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Mup7-203 | ENSMUST00000166098 | 1033 nt | APPRIS P3 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Samd15-201 | ENSMUST00000169669 | 1194 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Sptssb-202 | ENSMUST00000171529 | 772 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Vmn1r23-201 | ENSMUST00000175817 | 997 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav6d-7-201 | ENSMUST00000178650 | 358 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav6n-7-201 | ENSMUST00000179607 | 358 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | D630011A20Rik-201 | ENSMUST00000180858 | 500 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm4221-201 | ENSMUST00000181538 | 1232 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Mir3473g-201 | ENSMUST00000183494 | 136 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm27240-201 | ENSMUST00000183616 | 677 nt | TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav12d-1-202 | ENSMUST00000183652 | 344 nt | APPRIS ALT2 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | 1810053B23Rik-201 | ENSMUST00000185242 | 634 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm28358-201 | ENSMUST00000187860 | 636 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm18426-201 | ENSMUST00000191874 | 973 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm8860-201 | ENSMUST00000193160 | 445 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm8454-201 | ENSMUST00000196980 | 811 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Trav6d-6-201 | ENSMUST00000197754 | 344 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm44225-201 | ENSMUST00000203582 | 186 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm34225-201 | ENSMUST00000205469 | 443 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm45196-201 | ENSMUST00000206751 | 825 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm38584-201 | ENSMUST00000207361 | 517 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm44623-201 | ENSMUST00000207934 | 434 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | 4930543K20Rik-201 | ENSMUST00000217044 | 355 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm8264-201 | ENSMUST00000217801 | 465 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | AC119894.1-201 | ENSMUST00000220399 | 350 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | AC154594.1-201 | ENSMUST00000225171 | 1273 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | AC113269.1-201 | ENSMUST00000227185 | 674 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | CT025525.3-201 | ENSMUST00000228858 | 366 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Pdcd10-201 | ENSMUST00000029424 | 907 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Rpgr-201 | ENSMUST00000044598 | 3805 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Tmed11-201 | ENSMUST00000004943 | 763 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Olfr267-201 | ENSMUST00000059608 | 944 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm5160-201 | ENSMUST00000069552 | 444 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Olfr193-201 | ENSMUST00000076262 | 1009 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Mir463-201 | ENSMUST00000093570 | 75 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gml2-201 | ENSMUST00000096399 | 808 nt | APPRIS P2 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Olfr1480-202 | ENSMUST00000207093 | 1819 nt | APPRIS P1 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Soat1-201 | ENSMUST00000051396 | 2925 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Naip3-201 | ENSMUST00000118082 | 4208 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm765-201 | ENSMUST00000164491 | 3132 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Ano5-202 | ENSMUST00000207044 | 3311 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Chek1-201 | ENSMUST00000034625 | 3397 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Lrrtm4-208 | ENSMUST00000147663 | 3033 nt | APPRIS P2 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm28320-201 | ENSMUST00000187777 | 2273 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Vmn2r2-201 | ENSMUST00000077958 | 2484 nt | APPRIS P2 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Olfr1504-202 | ENSMUST00000209192 | 1514 nt | APPRIS P1 TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | BC018473-204 | ENSMUST00000156293 | 4753 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm8401-201 | ENSMUST00000120248 | 1739 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | AC132336.1-201 | ENSMUST00000222844 | 1740 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | BC046251-201 | ENSMUST00000154632 | 3653 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Cd36-202 | ENSMUST00000165232 | 2708 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Mfsd4b4-201 | ENSMUST00000178045 | 3508 nt | APPRIS P1 TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm8126-201 | ENSMUST00000169587 | 1764 nt | APPRIS P1 TSL 2 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Dennd6a-204 | ENSMUST00000224248 | 2775 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Klrk1-205 | ENSMUST00000168919 | 3197 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Olfr1170-202 | ENSMUST00000214386 | 3355 nt | APPRIS P1 TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | AW554918-208 | ENSMUST00000165400 | 5351 nt | APPRIS ALT2 TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | AW554918-202 | ENSMUST00000097643 | 5351 nt | APPRIS ALT2 TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm45520-201 | ENSMUST00000210109 | 2031 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm44695-201 | ENSMUST00000205567 | 1631 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Abi3bp-201 | ENSMUST00000048471 | 4687 nt | APPRIS P4 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | 4931412I15Rik-201 | ENSMUST00000207844 | 1448 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm5949-201 | ENSMUST00000213468 | 1421 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm12388-201 | ENSMUST00000119112 | 1887 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Hc-201 | ENSMUST00000028233 | 5445 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm29274-202 | ENSMUST00000188814 | 1498 nt | TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Dnah6-201 | ENSMUST00000064948 | 12652 nt | APPRIS P2 TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Ighv5-9-1-201 | ENSMUST00000103452 | 350 nt | APPRIS ALT2 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Tcrg-V7-201 | ENSMUST00000103553 | 368 nt | APPRIS P1 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm25795-201 | ENSMUST00000104421 | 132 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm10241-201 | ENSMUST00000117664 | 286 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm15332-201 | ENSMUST00000118386 | 357 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm12677-201 | ENSMUST00000118668 | 426 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm15786-201 | ENSMUST00000121079 | 450 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm5383-201 | ENSMUST00000121177 | 617 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm12618-201 | ENSMUST00000121754 | 483 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm13029-201 | ENSMUST00000137283 | 594 nt | TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm12259-201 | ENSMUST00000138391 | 328 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Cyp3a25-202 | ENSMUST00000138870 | 513 nt | TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa3 | P02831 | Gm12753-201 | ENSMUST00000152086 | 653 nt | TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |