Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm26046-201ENSMUST00000157312 166 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm9672-201ENSMUST00000166437 425 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm23379-201ENSMUST00000180026 107 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm11392-201ENSMUST00000181419 710 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm27596-201ENSMUST00000185061 83 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm27538-201ENSMUST00000185065 294 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm29259-201ENSMUST00000186396 694 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm37103-201ENSMUST00000191830 115 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm43897-201ENSMUST00000204019 309 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm9357-201ENSMUST00000207138 805 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm36247-201ENSMUST00000211834 285 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm18729-201ENSMUST00000217230 621 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm8275-201ENSMUST00000219732 424 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC122539.1-201ENSMUST00000219925 329 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm46312-201ENSMUST00000220961 420 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm6776-201ENSMUST00000057752 900 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm24623-201ENSMUST00000082616 194 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm22091-201ENSMUST00000116908 127 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm12937-201ENSMUST00000118333 448 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm12040-201ENSMUST00000118357 537 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm14515-201ENSMUST00000121327 216 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm23212-201ENSMUST00000122718 60 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm14349-201ENSMUST00000137155 902 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm16113-201ENSMUST00000159629 372 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm22702-201ENSMUST00000175372 69 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm9529-201ENSMUST00000177598 579 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm27522-201ENSMUST00000183949 230 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm42818-201ENSMUST00000198869 987 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm7463-201ENSMUST00000201541 547 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm44252-201ENSMUST00000204187 330 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm45034-201ENSMUST00000206831 482 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 AL929417.1-201ENSMUST00000214901 124 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdh1F7BJK1 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms