Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm3267-201ENSMUST00000118671 473 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm24188-201ENSMUST00000157980 108 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm25348-201ENSMUST00000158961 111 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm21816-201ENSMUST00000179255 360 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm18329-201ENSMUST00000215832 589 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm22826-201ENSMUST00000083774 165 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col4a6B1AVK5 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm16149-201ENSMUST00000117631 309 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm20954-201ENSMUST00000189078 644 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm29592-201ENSMUST00000189434 370 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm37745-201ENSMUST00000193304 8163 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.61□□□□□ -1.51
Col4a6B1AVK5 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm24117-201ENSMUST00000103973 133 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm22899-201ENSMUST00000104540 131 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm43919-201ENSMUST00000204303 364 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm22456-201ENSMUST00000082578 125 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col4a6B1AVK5 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms