Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm13038-201ENSMUST00000119886 459 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm14202-201ENSMUST00000120121 311 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm4992-201ENSMUST00000120256 768 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm23032-201ENSMUST00000157995 107 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm23028-201ENSMUST00000158773 265 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm22166-201ENSMUST00000178419 121 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm23288-201ENSMUST00000179213 121 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm18969-201ENSMUST00000189423 730 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm29490-201ENSMUST00000190923 342 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm45478-201ENSMUST00000209472 211 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm20900-201ENSMUST00000078729 472 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm43092-201ENSMUST00000202986 1854 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm14756-201ENSMUST00000116395 240 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm25111-201ENSMUST00000116686 147 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Zfp389-201ENSMUST00000118425 675 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm15126-201ENSMUST00000118631 833 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm6067-201ENSMUST00000121648 491 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm24130-201ENSMUST00000158536 151 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm24741-201ENSMUST00000158857 106 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm17044-201ENSMUST00000168549 828 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm27019-201ENSMUST00000183056 404 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm28416-201ENSMUST00000188334 292 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm28474-201ENSMUST00000188501 315 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm44471-201ENSMUST00000197963 100 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm3103-201ENSMUST00000198073 752 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm9240-201ENSMUST00000206527 742 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm45782-201ENSMUST00000212670 366 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.54□□□□□ -1.36
Trim39Q9ESN2 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.54□□□□□ -1.36
Trim39Q9ESN2 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms