Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ube3bQ9ES34 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm18880-201ENSMUST00000223333 1541 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm25876-201ENSMUST00000104329 119 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm13137-201ENSMUST00000118035 345 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm11796-201ENSMUST00000120208 972 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm25435-201ENSMUST00000158277 267 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm20691-201ENSMUST00000176889 333 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm9529-201ENSMUST00000177598 579 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Mup-ps7-201ENSMUST00000178292 545 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Mup-ps8-201ENSMUST00000178663 545 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Mup-ps9-201ENSMUST00000178847 545 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Mup-ps6-201ENSMUST00000179564 545 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm27964-201ENSMUST00000185195 62 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm28507-201ENSMUST00000189737 703 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm44373-201ENSMUST00000196112 169 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm9245-201ENSMUST00000200528 983 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm44852-201ENSMUST00000207950 369 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 AC122327.2-201ENSMUST00000220883 120 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 AC122327.3-201ENSMUST00000221852 120 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 AC166341.1-201ENSMUST00000223360 105 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 AC131747.1-201ENSMUST00000226159 793 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Mir181a-2-201ENSMUST00000083489 76 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.1□□□□□ -1.11
Ube3bQ9ES34 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm7754-201ENSMUST00000223075 2064 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm11943-201ENSMUST00000119473 327 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm15193-201ENSMUST00000120224 865 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm3835-201ENSMUST00000120752 403 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm12900-201ENSMUST00000120919 573 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm12876-201ENSMUST00000120975 408 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm26256-201ENSMUST00000122499 186 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm12504-202ENSMUST00000148026 306 ntBASIC8.09□□□□□ -1.11
Ube3bQ9ES34 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms