Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Zfp389-201ENSMUST00000118425 675 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm4989-201ENSMUST00000118711 749 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm13537-201ENSMUST00000120467 267 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm26069-201ENSMUST00000157497 277 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm17511-201ENSMUST00000172206 342 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm37024-201ENSMUST00000192224 868 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm2429-201ENSMUST00000194635 586 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm9278-201ENSMUST00000205508 553 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm7990-201ENSMUST00000212126 593 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Gm36501-201ENSMUST00000221857 745 ntBASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdc40Q9DC48 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm13311-201ENSMUST00000117863 379 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm12650-201ENSMUST00000121966 258 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm22596-201ENSMUST00000157601 316 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm24692-201ENSMUST00000157761 146 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm22361-201ENSMUST00000158435 176 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm8032-201ENSMUST00000171009 574 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm29376-201ENSMUST00000189357 835 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm19104-201ENSMUST00000198392 679 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm44463-201ENSMUST00000198895 137 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm4874-201ENSMUST00000203589 691 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm7768-201ENSMUST00000222988 597 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdc40Q9DC48 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdc40Q9DC48 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms