Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm14163-201ENSMUST00000117342 217 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm13459-201ENSMUST00000121558 646 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm5277-201ENSMUST00000164923 556 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm27348-201ENSMUST00000184511 170 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm28688-201ENSMUST00000187301 268 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm28080-201ENSMUST00000188552 722 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm28466-201ENSMUST00000190678 659 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm37774-201ENSMUST00000194401 245 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm5050-201ENSMUST00000197164 775 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm5886-202ENSMUST00000203957 522 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm44952-201ENSMUST00000204443 433 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm44538-201ENSMUST00000205615 348 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm18877-201ENSMUST00000207706 539 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm3266-201ENSMUST00000217832 591 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm9292-201ENSMUST00000222008 710 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm18338-201ENSMUST00000222381 560 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC107369.1-201ENSMUST00000227373 860 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm24041-201ENSMUST00000083115 156 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm36962-201ENSMUST00000192114 1761 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm11719-201ENSMUST00000119399 351 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm4234-201ENSMUST00000119747 714 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm16053-201ENSMUST00000120511 188 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm13009-201ENSMUST00000121307 267 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm13502-201ENSMUST00000121574 684 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm23179-201ENSMUST00000158693 304 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm17038-201ENSMUST00000166586 494 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm20480-201ENSMUST00000173953 250 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm29086-201ENSMUST00000186774 222 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm29085-201ENSMUST00000187108 225 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm35570-201ENSMUST00000198730 681 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 CT009733.1-203ENSMUST00000224033 451 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ddx56Q9D0R4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms