Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nkx6-1Q99MA9 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm36927-201ENSMUST00000192504 1841 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm13728-201ENSMUST00000117471 400 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm10241-201ENSMUST00000117664 286 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm14899-201ENSMUST00000118673 548 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm12433-201ENSMUST00000119659 255 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm12045-201ENSMUST00000122122 573 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm22342-201ENSMUST00000122647 298 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm23539-201ENSMUST00000157537 224 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm24724-201ENSMUST00000158230 107 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm24733-201ENSMUST00000158863 253 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm18604-201ENSMUST00000172535 558 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Mir3097-201ENSMUST00000175356 67 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm29413-201ENSMUST00000186019 880 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm29639-201ENSMUST00000188375 580 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm29920-201ENSMUST00000206876 754 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm44961-201ENSMUST00000207450 196 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm36262-201ENSMUST00000223274 499 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm24144-201ENSMUST00000082632 111 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm23452-201ENSMUST00000083327 107 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Olfr467-201ENSMUST00000084756 927 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx6-1Q99MA9 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm43498-201ENSMUST00000202002 1486 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm26422-201ENSMUST00000104276 132 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm22072-201ENSMUST00000116850 121 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm14887-201ENSMUST00000119522 663 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm7309-201ENSMUST00000121670 581 ntBASIC6.24□□□□□ -1.41
Nkx6-1Q99MA9 Gm14613-201ENSMUST00000122239 752 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms