Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm14036-201ENSMUST00000118248 480 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm9225-201ENSMUST00000121921 836 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm24059-201ENSMUST00000157493 312 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm25428-201ENSMUST00000157608 114 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm22842-201ENSMUST00000157709 118 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Mir3072-201ENSMUST00000175610 83 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Mir1231-201ENSMUST00000175639 81 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm27435-201ENSMUST00000183588 88 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm28193-201ENSMUST00000189863 615 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm42621-201ENSMUST00000198114 275 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm43825-201ENSMUST00000199650 734 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm42558-201ENSMUST00000200982 265 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm43039-201ENSMUST00000202883 963 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm8058-201ENSMUST00000217247 587 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm21321-201ENSMUST00000220179 446 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 AC092710.1-201ENSMUST00000221005 192 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Gm35558-203ENSMUST00000222264 204 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 AC167192.2-201ENSMUST00000224794 198 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 AC163646.1-201ENSMUST00000227704 397 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 AC131586.4-201ENSMUST00000228424 668 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.4□□□□□ -1.22
Pcdhb3Q91XZ7 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 AC158779.2-201ENSMUST00000227902 1947 ntBASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Pcdhb3Q91XZ7 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm42520-201ENSMUST00000199642 1502 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm24079-201ENSMUST00000104352 132 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm23529-201ENSMUST00000104562 132 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm13890-201ENSMUST00000117578 390 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm13835-201ENSMUST00000118459 685 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm11997-201ENSMUST00000118697 313 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm14930-201ENSMUST00000118864 652 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm12870-201ENSMUST00000121383 1016 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm15096-201ENSMUST00000121918 878 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm15079-201ENSMUST00000121943 216 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm26351-201ENSMUST00000157532 232 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm23473-201ENSMUST00000158883 116 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm8307-201ENSMUST00000187682 1150 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm37658-201ENSMUST00000192672 315 ntBASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC7.39□□□□□ -1.23
Pcdhb3Q91XZ7 Gm8747-201ENSMUST00000195392 751 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms