Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm11774-201ENSMUST00000118601 293 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm11826-201ENSMUST00000118781 438 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm14018-201ENSMUST00000119042 455 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm16423-201ENSMUST00000120078 947 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm7494-201ENSMUST00000121248 441 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm13366-201ENSMUST00000122198 970 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm25219-201ENSMUST00000157545 330 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm16298-201ENSMUST00000161107 420 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm22690-201ENSMUST00000175054 110 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm29474-201ENSMUST00000187688 379 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm29011-201ENSMUST00000191059 712 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm43516-201ENSMUST00000196891 322 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm43629-201ENSMUST00000201782 704 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm18011-201ENSMUST00000203717 565 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm8256-203ENSMUST00000228692 591 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm24069-201ENSMUST00000104512 127 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Snora35-201ENSMUST00000104579 128 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm23839-201ENSMUST00000116957 109 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm12439-201ENSMUST00000117162 365 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm8129-201ENSMUST00000118230 213 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm13866-201ENSMUST00000118901 968 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm12494-201ENSMUST00000121684 521 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37177-201ENSMUST00000193768 417 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm37809-201ENSMUST00000195050 931 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm42961-201ENSMUST00000202023 181 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm18620-201ENSMUST00000222295 324 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc28bQ8CEG5 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms