Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup54Q8BTS4 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Nup54Q8BTS4 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.66□□□□□ -1.5
Nup54Q8BTS4 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup54Q8BTS4 Naip3-201ENSMUST00000118082 4208 ntBASIC5.66□□□□□ -1.5
Nup54Q8BTS4 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm12985-201ENSMUST00000118376 183 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm3943-201ENSMUST00000118606 718 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm14521-201ENSMUST00000119545 350 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm24940-201ENSMUST00000158326 108 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm23806-201ENSMUST00000175157 109 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm6223-201ENSMUST00000178436 871 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Mir7653-201ENSMUST00000184358 61 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm19231-201ENSMUST00000193212 830 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm37681-201ENSMUST00000193880 727 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm38217-201ENSMUST00000194358 910 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm37072-201ENSMUST00000194570 837 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm43945-201ENSMUST00000203595 754 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Gm3800-201ENSMUST00000221086 554 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Nup54Q8BTS4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.65□□□□□ -1.51
Nup54Q8BTS4 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nup54Q8BTS4 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.65□□□□□ -1.51
Nup54Q8BTS4 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.65□□□□□ -1.51
Nup54Q8BTS4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.65□□□□□ -1.51
Nup54Q8BTS4 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nup54Q8BTS4 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm15073-201ENSMUST00000117432 634 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm11447-201ENSMUST00000118983 858 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm13690-201ENSMUST00000118989 285 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm25430-201ENSMUST00000157614 289 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm24236-201ENSMUST00000157794 134 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm16112-201ENSMUST00000159075 382 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm3008-201ENSMUST00000160566 571 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm15812-201ENSMUST00000162331 748 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm23162-201ENSMUST00000175081 121 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm27468-201ENSMUST00000183577 106 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm27225-201ENSMUST00000183833 557 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm43444-201ENSMUST00000198123 291 ntBASIC5.64□□□□□ -1.51
Nup54Q8BTS4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms