Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm12734-201ENSMUST00000120228 948 ntBASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm28976-201ENSMUST00000188070 144 ntBASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm44412-201ENSMUST00000203018 294 ntBASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm45635-201ENSMUST00000211516 2134 ntBASIC6.34□□□□□ -1.39
Nup98Q6PFD9 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nup98Q6PFD9 Gm23593-201ENSMUST00000104309 120 ntBASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Gm12413-201ENSMUST00000121508 312 ntBASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Gm14212-201ENSMUST00000122023 826 ntBASIC6.34□□□□□ -1.4
Nup98Q6PFD9 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.34□□□□□ -1.4
Nup98Q6PFD9 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Olfr151-202ENSMUST00000221099 929 ntBASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.34□□□□□ -1.4
Nup98Q6PFD9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm26376-201ENSMUST00000104784 110 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm8202-201ENSMUST00000117682 310 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm15388-201ENSMUST00000121578 726 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm13077-201ENSMUST00000121941 484 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm23354-201ENSMUST00000158426 104 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm20674-201ENSMUST00000177452 369 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm28847-201ENSMUST00000186778 700 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Mir20a-201ENSMUST00000083508 107 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Mir17-201ENSMUST00000083574 84 ntBASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Nup98Q6PFD9 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm22725-201ENSMUST00000158092 110 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm21909-201ENSMUST00000178260 439 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm5285-201ENSMUST00000193089 666 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.32□□□□□ -1.4
Nup98Q6PFD9 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.32□□□□□ -1.4
Nup98Q6PFD9 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms