Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm12189-201ENSMUST00000119779 912 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm23211-201ENSMUST00000122717 308 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm24395-201ENSMUST00000158139 125 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm16139-201ENSMUST00000160015 420 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm15812-201ENSMUST00000162331 748 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm9027-201ENSMUST00000165914 661 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm27409-201ENSMUST00000184727 80 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm37719-201ENSMUST00000194615 292 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm44134-202ENSMUST00000204777 545 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm45026-201ENSMUST00000205292 833 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm18255-201ENSMUST00000211316 765 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm10064-201ENSMUST00000071235 399 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Mir331-201ENSMUST00000083673 96 ntBASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upf3bQ3ULL6 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm14659-201ENSMUST00000117667 843 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm14220-201ENSMUST00000118114 449 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm3931-201ENSMUST00000119038 455 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm11369-201ENSMUST00000120812 318 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm24065-201ENSMUST00000157487 264 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm25430-201ENSMUST00000157614 289 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm20519-201ENSMUST00000173684 359 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm8941-201ENSMUST00000181451 899 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm46192-201ENSMUST00000217894 326 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Upf3bQ3ULL6 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Zfp389-201ENSMUST00000118425 675 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Upf3bQ3ULL6 Mir1970-201ENSMUST00000157839 104 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms