Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm37186-201ENSMUST00000195629 2861 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm42544-201ENSMUST00000197868 3242 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Mir678-201ENSMUST00000102114 84 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm12583-201ENSMUST00000120677 853 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm7840-201ENSMUST00000122086 533 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm13214-201ENSMUST00000122137 408 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm18128-201ENSMUST00000172625 511 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.65□□□□□ -1.02
Col17a1Q07563 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm2367-201ENSMUST00000192374 472 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC8.65□□□□□ -1.02
Col17a1Q07563 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm20644-201ENSMUST00000176721 2063 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Gm44235-201ENSMUST00000204312 3058 ntBASIC8.65□□□□□ -1.02
Col17a1Q07563 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Col17a1Q07563 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Col17a1Q07563 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col17a1Q07563 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col17a1Q07563 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm25058-201ENSMUST00000157365 128 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm37838-201ENSMUST00000194464 312 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm37445-201ENSMUST00000195318 242 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC8.64□□□□□ -1.03
Col17a1Q07563 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm18628-201ENSMUST00000220584 475 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 AC211878.1-201ENSMUST00000221668 474 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Mir323-201ENSMUST00000083683 86 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Col17a1Q07563 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Col17a1Q07563 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm42736-201ENSMUST00000200723 1353 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm7108-201ENSMUST00000118038 3407 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm43611-201ENSMUST00000196656 4352 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm43180-201ENSMUST00000197541 2886 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col17a1Q07563 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm22211-201ENSMUST00000158097 156 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Mir5710-201ENSMUST00000176884 69 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm27976-201ENSMUST00000183635 162 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm28390-201ENSMUST00000185212 700 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm31306-201ENSMUST00000197517 508 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm43604-201ENSMUST00000199799 705 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC8.64□□□□□ -1.03
Col17a1Q07563 AC140368.1-202ENSMUST00000226131 658 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm5045-201ENSMUST00000027054 810 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Col17a1Q07563 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col17a1Q07563 Gm25139-201ENSMUST00000083247 210 ntBASIC8.64□□□□□ -1.03
Col17a1Q07563 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col17a1Q07563 Gm38156-201ENSMUST00000194601 2260 ntBASIC8.63□□□□□ -1.03
Col17a1Q07563 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms