Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Gm10555-201ENSMUST00000193178 1791 ntBASIC5.6□□□□□ -1.51
Col8a1Q00780 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col8a1Q00780 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Col8a1Q00780 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Col8a1Q00780 AC158988.1-201ENSMUST00000226731 2624 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm13579-201ENSMUST00000118519 517 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm11606-201ENSMUST00000120706 617 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm12006-201ENSMUST00000120786 403 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm14237-201ENSMUST00000122080 430 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm24179-201ENSMUST00000158925 127 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm17194-201ENSMUST00000164610 348 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Col8a1Q00780 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm37869-201ENSMUST00000193385 595 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm17824-201ENSMUST00000197690 805 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.59□□□□□ -1.51
Col8a1Q00780 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm25587-201ENSMUST00000082498 166 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col8a1Q00780 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.59□□□□□ -1.51
Col8a1Q00780 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col8a1Q00780 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Col8a1Q00780 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Col8a1Q00780 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Col8a1Q00780 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col8a1Q00780 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.59□□□□□ -1.52
Col8a1Q00780 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms