Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm28566-201ENSMUST00000186714 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28194-201ENSMUST00000187412 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28886-202ENSMUST00000187889 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28554-202ENSMUST00000189175 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29213-202ENSMUST00000189703 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28851-202ENSMUST00000189757 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28461-201ENSMUST00000190023 484 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm42814-201ENSMUST00000199370 460 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Clec2j-202ENSMUST00000203658 606 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm3257-201ENSMUST00000207217 675 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Mir449a-201ENSMUST00000083641 91 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.83□□□□□ -1.64
Nkx3-1P97436 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx3-1P97436 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm43788-201ENSMUST00000201539 2417 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm7079-201ENSMUST00000119726 171 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Gm15428-201ENSMUST00000121352 333 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.82□□□□□ -1.64
Nkx3-1P97436 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 165.2 ms