Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
PrkdcP97313 AC160028.2-201ENSMUST00000218937 2519 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm38362-201ENSMUST00000192999 2064 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 AC174797.5-201ENSMUST00000225055 1860 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PrkdcP97313 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm14725-201ENSMUST00000120324 828 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 AC120011.1-201ENSMUST00000202147 744 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm37077-201ENSMUST00000195723 3691 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm11245-201ENSMUST00000119419 1037 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm22819-201ENSMUST00000157445 303 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm28654-201ENSMUST00000189801 379 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm43309-201ENSMUST00000200837 458 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Gm24031-201ENSMUST00000083930 131 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Gm43784-201ENSMUST00000202922 2436 ntBASIC3.62□□□□□ -1.83
PrkdcP97313 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PrkdcP97313 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PrkdcP97313 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PrkdcP97313 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PrkdcP97313 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PrkdcP97313 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm11931-201ENSMUST00000121630 447 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm26170-201ENSMUST00000158419 148 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm9443-201ENSMUST00000188406 816 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm2497-201ENSMUST00000189539 601 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29036-201ENSMUST00000189967 877 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm29736-201ENSMUST00000198189 385 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm21461-201ENSMUST00000200382 863 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm7721-201ENSMUST00000200446 546 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 AC164597.1-201ENSMUST00000226538 514 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PrkdcP97313 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm42645-201ENSMUST00000201573 1627 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm12755-201ENSMUST00000122297 282 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm24186-201ENSMUST00000157983 127 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 AC125399.1-201ENSMUST00000224236 595 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm37106-201ENSMUST00000193760 1532 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm43359-201ENSMUST00000197944 2200 ntBASIC3.61□□□□□ -1.83
PrkdcP97313 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PrkdcP97313 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
PrkdcP97313 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC3.61□□□□□ -1.83
PrkdcP97313 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PrkdcP97313 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms