Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.13□□□□□ -1.43
CiitaP79621 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CiitaP79621 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CiitaP79621 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.13□□□□□ -1.43
CiitaP79621 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.13□□□□□ -1.43
CiitaP79621 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CiitaP79621 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CiitaP79621 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CiitaP79621 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm24230-201ENSMUST00000104313 129 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm13681-201ENSMUST00000117925 210 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm13579-201ENSMUST00000118519 517 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm11481-201ENSMUST00000120069 255 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm5405-201ENSMUST00000120478 609 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm3008-201ENSMUST00000160566 571 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Gm17511-201ENSMUST00000172206 342 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CiitaP79621 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Gm20770-201ENSMUST00000193474 694 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm37681-201ENSMUST00000193880 727 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm18587-201ENSMUST00000213736 841 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.12□□□□□ -1.43
CiitaP79621 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.12□□□□□ -1.43
CiitaP79621 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm10064-201ENSMUST00000071235 399 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm4822-201ENSMUST00000077551 479 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm25682-201ENSMUST00000083942 164 ntBASIC6.12□□□□□ -1.43
CiitaP79621 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CiitaP79621 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.12□□□□□ -1.43
CiitaP79621 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
CiitaP79621 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.12□□□□□ -1.43
CiitaP79621 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CiitaP79621 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
CiitaP79621 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
CiitaP79621 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CiitaP79621 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.11□□□□□ -1.43
CiitaP79621 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm15171-201ENSMUST00000122191 334 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Gm17142-201ENSMUST00000164933 645 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CiitaP79621 Gm21959-201ENSMUST00000178439 452 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm26595-201ENSMUST00000181585 484 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Mir6374-201ENSMUST00000184003 107 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Gm38670-201ENSMUST00000199248 77 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.11□□□□□ -1.43
CiitaP79621 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm44580-201ENSMUST00000206333 877 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.11□□□□□ -1.43
CiitaP79621 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.11□□□□□ -1.43
CiitaP79621 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.11□□□□□ -1.43
CiitaP79621 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.11□□□□□ -1.43
CiitaP79621 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CiitaP79621 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CiitaP79621 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms