Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm15186-201ENSMUST00000119345 563 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm24444-201ENSMUST00000157244 308 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm22262-201ENSMUST00000158713 86 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm23343-201ENSMUST00000158964 143 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox1P53783 Mir3095-201ENSMUST00000175552 87 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm26092-201ENSMUST00000179798 97 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Mir669a-1-201ENSMUST00000180238 97 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm27006-201ENSMUST00000182218 943 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm27919-201ENSMUST00000185163 107 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm18849-201ENSMUST00000189861 560 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm37869-201ENSMUST00000193385 595 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm43350-201ENSMUST00000196382 711 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm43655-201ENSMUST00000197367 222 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm2622-201ENSMUST00000200018 471 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm43472-201ENSMUST00000200175 154 ntBASIC6.8□□□□□ -1.32
Sox1P53783 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm2011-203ENSMUST00000203750 435 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Gm45228-201ENSMUST00000206585 352 ntBASIC6.8□□□□□ -1.32
Sox1P53783 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm45789-201ENSMUST00000213038 364 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm29809-201ENSMUST00000218423 493 ntBASIC6.8□□□□□ -1.32
Sox1P53783 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 AC124524.2-201ENSMUST00000223940 588 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Sox1P53783 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox1P53783 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox1P53783 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox1P53783 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Sox1P53783 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Sox1P53783 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Gm15149-201ENSMUST00000119370 360 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm15763-201ENSMUST00000120136 403 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm5383-201ENSMUST00000121177 617 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm12685-201ENSMUST00000121702 214 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox1P53783 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Gm9785-202ENSMUST00000144563 593 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm7316-201ENSMUST00000165395 445 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Sox1P53783 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Gm28377-201ENSMUST00000189695 720 ntBASIC6.79□□□□□ -1.32
Sox1P53783 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Gm7832-201ENSMUST00000202613 880 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm45689-201ENSMUST00000210522 133 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Sox1P53783 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 AC139376.1-201ENSMUST00000220056 1250 ntBASIC6.79□□□□□ -1.32
Sox1P53783 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm7768-201ENSMUST00000222988 597 ntBASIC6.79□□□□□ -1.32
Sox1P53783 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.79□□□□□ -1.32
Sox1P53783 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Sox1P53783 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm16335-201ENSMUST00000077495 309 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm23628-201ENSMUST00000082464 173 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm26072-201ENSMUST00000083135 107 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms