Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.29□□□□□ -1.4
Shmt1P50431 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Shmt1P50431 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Shmt1P50431 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Shmt1P50431 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Shmt1P50431 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.29□□□□□ -1.4
Shmt1P50431 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.29□□□□□ -1.4
Shmt1P50431 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Shmt1P50431 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.29□□□□□ -1.4
Shmt1P50431 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Shmt1P50431 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm26377-201ENSMUST00000102184 108 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm15078-201ENSMUST00000118371 782 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm15828-201ENSMUST00000119911 522 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm15227-201ENSMUST00000121844 399 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm26106-201ENSMUST00000157254 228 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm24960-201ENSMUST00000157923 90 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm23662-201ENSMUST00000158046 111 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm25363-201ENSMUST00000158850 245 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Shmt1P50431 Mir5125-201ENSMUST00000175240 79 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Mir3097-201ENSMUST00000175356 67 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm6472-201ENSMUST00000178147 651 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm8604-201ENSMUST00000183150 965 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm8498-201ENSMUST00000188227 974 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm29745-201ENSMUST00000198005 687 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Shmt1P50431 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm44219-201ENSMUST00000203005 273 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm44221-201ENSMUST00000203552 388 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm45269-201ENSMUST00000210359 282 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm45608-201ENSMUST00000210948 389 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm46223-201ENSMUST00000215196 675 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Gm18585-201ENSMUST00000215197 556 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Shmt1P50431 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm5321-201ENSMUST00000072050 447 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Shmt1P50431 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Shmt1P50431 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.28□□□□□ -1.4
Shmt1P50431 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Shmt1P50431 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Shmt1P50431 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Shmt1P50431 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Shmt1P50431 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.27□□□□□ -1.41
Shmt1P50431 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Shmt1P50431 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Shmt1P50431 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Shmt1P50431 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Shmt1P50431 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Shmt1P50431 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms