Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HttP42859 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.54□□□□□ -1.52
HttP42859 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.54□□□□□ -1.52
HttP42859 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.54□□□□□ -1.52
HttP42859 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Gm12281-201ENSMUST00000119536 298 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm13220-201ENSMUST00000121535 508 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm5558-201ENSMUST00000178933 495 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.54□□□□□ -1.52
HttP42859 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
HttP42859 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.54□□□□□ -1.52
HttP42859 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.54□□□□□ -1.52
HttP42859 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.54□□□□□ -1.52
HttP42859 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HttP42859 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.53□□□□□ -1.52
HttP42859 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.53□□□□□ -1.52
HttP42859 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HttP42859 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HttP42859 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Gm11227-201ENSMUST00000119774 471 ntBASIC5.53□□□□□ -1.52
HttP42859 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HttP42859 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HttP42859 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.53□□□□□ -1.52
HttP42859 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm18181-201ENSMUST00000190670 736 ntBASIC5.53□□□□□ -1.52
HttP42859 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.53□□□□□ -1.52
HttP42859 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.53□□□□□ -1.52
HttP42859 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.53□□□□□ -1.52
HttP42859 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.53□□□□□ -1.52
HttP42859 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.53□□□□□ -1.52
HttP42859 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HttP42859 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.52□□□□□ -1.52
HttP42859 Gm16149-201ENSMUST00000117631 309 ntBASIC5.52□□□□□ -1.53
HttP42859 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm12186-201ENSMUST00000119050 945 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.52□□□□□ -1.53
HttP42859 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HttP42859 Gm37581-201ENSMUST00000192371 988 ntBASIC5.52□□□□□ -1.53
HttP42859 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.52□□□□□ -1.53
HttP42859 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.52□□□□□ -1.53
HttP42859 Gm18618-201ENSMUST00000222211 473 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm24031-201ENSMUST00000083930 131 ntBASIC5.52□□□□□ -1.53
HttP42859 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.52□□□□□ -1.53
HttP42859 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HttP42859 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HttP42859 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.52□□□□□ -1.53
HttP42859 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms