Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox6P40645 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox6P40645 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox6P40645 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.18□□□□□ -1.58
Sox6P40645 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.18□□□□□ -1.58
Sox6P40645 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.18□□□□□ -1.58
Sox6P40645 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox6P40645 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox6P40645 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm24236-201ENSMUST00000157794 134 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Mir7072-201ENSMUST00000184542 60 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Sox6P40645 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox6P40645 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm37609-201ENSMUST00000191778 678 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm38097-201ENSMUST00000192936 439 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox6P40645 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm31306-201ENSMUST00000197517 508 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm44432-201ENSMUST00000203342 938 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm19900-201ENSMUST00000207285 576 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox6P40645 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox6P40645 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox6P40645 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.17□□□□□ -1.58
Sox6P40645 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sox6P40645 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox6P40645 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox6P40645 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox6P40645 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.17□□□□□ -1.58
Sox6P40645 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Sox6P40645 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Sox6P40645 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.16□□□□□ -1.58
Sox6P40645 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Sox6P40645 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Sox6P40645 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox6P40645 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Sox6P40645 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Gm11270-201ENSMUST00000117685 471 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm13363-201ENSMUST00000122008 522 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm24383-201ENSMUST00000122691 333 ntBASIC5.16□□□□□ -1.58
Sox6P40645 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm24731-201ENSMUST00000158227 131 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm25048-201ENSMUST00000158598 91 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm24303-201ENSMUST00000178237 126 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm38122-201ENSMUST00000192679 885 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm17952-201ENSMUST00000193914 747 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm44360-201ENSMUST00000200081 82 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm5735-201ENSMUST00000207053 167 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm45485-201ENSMUST00000211229 357 ntBASIC5.16□□□□□ -1.58
Sox6P40645 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.16□□□□□ -1.58
Sox6P40645 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Sox6P40645 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox6P40645 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox6P40645 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox6P40645 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.16□□□□□ -1.58
Sox6P40645 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.16□□□□□ -1.58
Sox6P40645 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms