Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cxcl12P40224 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cxcl12P40224 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cxcl12P40224 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cxcl12P40224 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cxcl12P40224 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm11346-201ENSMUST00000118346 704 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm14515-201ENSMUST00000121327 216 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm26167-201ENSMUST00000158423 253 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm23700-201ENSMUST00000158842 102 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm16571-201ENSMUST00000159112 291 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm20453-201ENSMUST00000173968 226 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm20954-201ENSMUST00000189078 644 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm29785-201ENSMUST00000217033 383 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.71□□□□□ -1.5
Cxcl12P40224 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm22456-201ENSMUST00000082578 125 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cxcl12P40224 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Cxcl12P40224 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm24125-201ENSMUST00000104105 137 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm11912-201ENSMUST00000117235 264 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm25278-201ENSMUST00000157267 120 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm9278-201ENSMUST00000205508 553 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm2099-201ENSMUST00000220979 412 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.7□□□□□ -1.5
Cxcl12P40224 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cxcl12P40224 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.7□□□□□ -1.5
Cxcl12P40224 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.69□□□□□ -1.5
Cxcl12P40224 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms