Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.7□□□□□ -1.66
Upk2P38575 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.7□□□□□ -1.66
Upk2P38575 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.7□□□□□ -1.66
Upk2P38575 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Gm10064-201ENSMUST00000071235 399 ntBASIC4.7□□□□□ -1.66
Upk2P38575 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upk2P38575 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.7□□□□□ -1.66
Upk2P38575 AL670757.1-201ENSMUST00000223668 1959 ntBASIC4.7□□□□□ -1.66
Upk2P38575 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.7□□□□□ -1.66
Upk2P38575 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Upk2P38575 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.7□□□□□ -1.66
Upk2P38575 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC4.7□□□□□ -1.66
Upk2P38575 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC4.7□□□□□ -1.66
Upk2P38575 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.7□□□□□ -1.66
Upk2P38575 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Upk2P38575 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Upk2P38575 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm13311-201ENSMUST00000117863 379 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Gm13579-201ENSMUST00000118519 517 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Gm14335-201ENSMUST00000119165 810 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm13245-201ENSMUST00000119646 260 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm8837-201ENSMUST00000161037 1107 ntBASIC4.69□□□□□ -1.66
Upk2P38575 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Gm8039-201ENSMUST00000204758 712 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Gm45734-201ENSMUST00000211916 411 ntBASIC4.69□□□□□ -1.66
Upk2P38575 LOC665443-201ENSMUST00000212284 796 ntBASIC4.69□□□□□ -1.66
Upk2P38575 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.69□□□□□ -1.66
Upk2P38575 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.69□□□□□ -1.66
Upk2P38575 AC122858.1-201ENSMUST00000226212 433 ntBASIC4.69□□□□□ -1.66
Upk2P38575 AC122858.3-201ENSMUST00000226341 740 ntBASIC4.69□□□□□ -1.66
Upk2P38575 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Upk2P38575 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Upk2P38575 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.69□□□□□ -1.66
Upk2P38575 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Upk2P38575 Gm7205-201ENSMUST00000196032 1323 ntBASIC4.69□□□□□ -1.66
Upk2P38575 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Upk2P38575 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Upk2P38575 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Upk2P38575 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Upk2P38575 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Upk2P38575 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Upk2P38575 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Upk2P38575 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Upk2P38575 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Upk2P38575 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm6134-201ENSMUST00000117265 171 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm26489-201ENSMUST00000157880 264 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Gm24186-201ENSMUST00000157983 127 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Gm25861-201ENSMUST00000158251 109 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Mir3572-201ENSMUST00000175549 86 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Gm6055-201ENSMUST00000180532 378 ntBASIC4.68□□□□□ -1.66
Upk2P38575 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Upk2P38575 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms