Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Gm2003-201ENSMUST00000118537 636 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm12988-201ENSMUST00000119054 478 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm1989-201ENSMUST00000126244 636 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.99□□□□□ -1.45
LdlrP35951 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.99□□□□□ -1.45
LdlrP35951 Mir1960-201ENSMUST00000157488 78 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm24962-201ENSMUST00000157917 109 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm24768-201ENSMUST00000158512 94 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC5.99□□□□□ -1.45
LdlrP35951 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Gm26968-201ENSMUST00000182894 481 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm27861-201ENSMUST00000183920 214 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm44360-201ENSMUST00000200081 82 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm5317-201ENSMUST00000204445 847 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm4374-201ENSMUST00000204929 424 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm45008-201ENSMUST00000206420 493 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm18467-201ENSMUST00000208805 434 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm18597-201ENSMUST00000209519 694 ntBASIC5.99□□□□□ -1.45
LdlrP35951 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm3266-201ENSMUST00000217832 591 ntBASIC5.99□□□□□ -1.45
LdlrP35951 AC116465.1-201ENSMUST00000220324 235 ntBASIC5.99□□□□□ -1.45
LdlrP35951 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.99□□□□□ -1.45
LdlrP35951 AC116395.1-201ENSMUST00000225480 1143 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LdlrP35951 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC5.99□□□□□ -1.45
LdlrP35951 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
LdlrP35951 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.99□□□□□ -1.45
LdlrP35951 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LdlrP35951 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LdlrP35951 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm23739-201ENSMUST00000102295 108 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm26067-201ENSMUST00000103789 110 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm22371-201ENSMUST00000104588 130 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm15125-201ENSMUST00000116185 800 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm13811-201ENSMUST00000117800 256 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm12442-201ENSMUST00000118372 338 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
LdlrP35951 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Mir1945-201ENSMUST00000157919 78 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm38360-201ENSMUST00000195130 454 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC5.98□□□□□ -1.45
LdlrP35951 AC124542.1-201ENSMUST00000205588 908 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm45912-201ENSMUST00000210646 543 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm45473-201ENSMUST00000211452 616 ntBASIC5.98□□□□□ -1.45
LdlrP35951 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm2614-201ENSMUST00000223227 403 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.98□□□□□ -1.45
LdlrP35951 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.98□□□□□ -1.45
LdlrP35951 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.98□□□□□ -1.45
LdlrP35951 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LdlrP35951 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LdlrP35951 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.98□□□□□ -1.45
LdlrP35951 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LdlrP35951 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
LdlrP35951 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LdlrP35951 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms