Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Cdx1P18111 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm18716-201ENSMUST00000204507 1603 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm23739-201ENSMUST00000102295 108 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm14695-201ENSMUST00000121721 282 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm23225-201ENSMUST00000158121 114 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm26037-201ENSMUST00000158150 311 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm8582-201ENSMUST00000164061 789 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm27512-201ENSMUST00000175328 126 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdx1P18111 Mir7020-201ENSMUST00000183787 70 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm27853-201ENSMUST00000184176 250 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm37241-201ENSMUST00000191736 523 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm37604-201ENSMUST00000191749 1272 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm43392-201ENSMUST00000196560 434 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm9317-201ENSMUST00000197055 862 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm42579-201ENSMUST00000200512 734 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm42458-201ENSMUST00000201914 369 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm43501-201ENSMUST00000202513 107 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.62□□□□□ -1.67
Cdx1P18111 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdx1P18111 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx1P18111 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Cdx1P18111 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 AC140393.3-201ENSMUST00000228396 1352 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx1P18111 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.62□□□□□ -1.67
Cdx1P18111 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
Cdx1P18111 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm22103-201ENSMUST00000116733 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm26475-201ENSMUST00000116769 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm23620-201ENSMUST00000116812 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm25042-201ENSMUST00000116856 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm25540-201ENSMUST00000116880 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm4789-201ENSMUST00000121708 1216 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm22084-201ENSMUST00000157585 105 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm23894-201ENSMUST00000158107 313 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm17421-201ENSMUST00000167845 674 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC4.61□□□□□ -1.67
Cdx1P18111 Mir5107-201ENSMUST00000175586 88 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm23550-201ENSMUST00000179003 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cdx1P18111 Gm25123-201ENSMUST00000179154 121 ntBASIC4.61□□□□□ -1.67
Cdx1P18111 Gm25353-201ENSMUST00000179366 121 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms