Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm42720-201ENSMUST00000196813 300 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gm42776-201ENSMUST00000198031 406 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm4290-201ENSMUST00000206897 814 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Gm45422-201ENSMUST00000211476 246 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col1a1P11087 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col1a1P11087 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm23686-201ENSMUST00000083241 164 ntBASIC6.4□□□□□ -1.39
Col1a1P11087 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col1a1P11087 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.4□□□□□ -1.39
Col1a1P11087 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.39□□□□□ -1.39
Col1a1P11087 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col1a1P11087 Gm22266-201ENSMUST00000104011 138 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Gm16254-201ENSMUST00000131528 730 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Gm22726-201ENSMUST00000158089 179 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Gm26970-201ENSMUST00000182990 964 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Mir5121-201ENSMUST00000198528 74 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 AC125543.1-201ENSMUST00000222778 101 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Gm5321-201ENSMUST00000072050 447 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col1a1P11087 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.39□□□□□ -1.39
Col1a1P11087 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col1a1P11087 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Col1a1P11087 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col1a1P11087 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col1a1P11087 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col1a1P11087 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.38□□□□□ -1.39
Col1a1P11087 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Col1a1P11087 Gm16007-201ENSMUST00000117837 286 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Gm12988-201ENSMUST00000119054 478 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.38□□□□□ -1.39
Col1a1P11087 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.38□□□□□ -1.39
Col1a1P11087 Gm15501-202ENSMUST00000140687 625 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.38□□□□□ -1.39
Col1a1P11087 Gm23993-201ENSMUST00000157478 144 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms