Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TnfP06804 Gm8581-201ENSMUST00000188636 890 ntBASIC5.81□□□□□ -1.48
TnfP06804 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.81□□□□□ -1.48
TnfP06804 Gm33952-201ENSMUST00000197795 408 ntBASIC5.81□□□□□ -1.48
TnfP06804 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.81□□□□□ -1.48
TnfP06804 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.81□□□□□ -1.48
TnfP06804 Gm7688-201ENSMUST00000212857 337 ntBASIC5.81□□□□□ -1.48
TnfP06804 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.81□□□□□ -1.48
TnfP06804 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.81□□□□□ -1.48
TnfP06804 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.81□□□□□ -1.48
TnfP06804 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.81□□□□□ -1.48
TnfP06804 Gm22456-201ENSMUST00000082578 125 ntBASIC5.81□□□□□ -1.48
TnfP06804 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TnfP06804 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.81□□□□□ -1.48
TnfP06804 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TnfP06804 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TnfP06804 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.8□□□□□ -1.48
TnfP06804 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.8□□□□□ -1.48
TnfP06804 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TnfP06804 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Mir546-201ENSMUST00000102105 121 ntBASIC5.8□□□□□ -1.48
TnfP06804 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.8□□□□□ -1.48
TnfP06804 Gm11805-201ENSMUST00000121238 600 ntBASIC5.8□□□□□ -1.48
TnfP06804 Gm13363-201ENSMUST00000122008 522 ntBASIC5.8□□□□□ -1.48
TnfP06804 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.8□□□□□ -1.48
TnfP06804 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TnfP06804 Gm17907-201ENSMUST00000173150 710 ntBASIC5.8□□□□□ -1.48
TnfP06804 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.8□□□□□ -1.48
TnfP06804 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TnfP06804 Gm29489-201ENSMUST00000188934 324 ntBASIC5.8□□□□□ -1.48
TnfP06804 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.8□□□□□ -1.48
TnfP06804 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.8□□□□□ -1.48
TnfP06804 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.8□□□□□ -1.48
TnfP06804 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.8□□□□□ -1.48
TnfP06804 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.8□□□□□ -1.48
TnfP06804 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.8□□□□□ -1.48
TnfP06804 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.8□□□□□ -1.48
TnfP06804 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
TnfP06804 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TnfP06804 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.8□□□□□ -1.48
TnfP06804 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TnfP06804 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.8□□□□□ -1.48
TnfP06804 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TnfP06804 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TnfP06804 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TnfP06804 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TnfP06804 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.79□□□□□ -1.48
TnfP06804 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TnfP06804 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
TnfP06804 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TnfP06804 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TnfP06804 Scarna13-201ENSMUST00000158164 275 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm4831-201ENSMUST00000174626 594 ntBASIC5.79□□□□□ -1.48
TnfP06804 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.79□□□□□ -1.48
TnfP06804 Gm28683-201ENSMUST00000187134 615 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm28840-205ENSMUST00000189320 615 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm28835-203ENSMUST00000190062 615 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.79□□□□□ -1.48
TnfP06804 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TnfP06804 Gm43629-201ENSMUST00000201782 704 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm18325-201ENSMUST00000203228 835 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm17984-201ENSMUST00000205286 859 ntBASIC5.79□□□□□ -1.48
TnfP06804 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TnfP06804 Gm19256-201ENSMUST00000218550 231 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm18904-201ENSMUST00000218756 329 ntBASIC5.79□□□□□ -1.48
TnfP06804 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.79□□□□□ -1.48
TnfP06804 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.79□□□□□ -1.48
TnfP06804 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms