Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.76□□□□□ -1.49
Cldn5O54942 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm22897-202ENSMUST00000197782 127 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 Gm36501-201ENSMUST00000221857 745 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cldn5O54942 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.76□□□□□ -1.49
Cldn5O54942 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Cldn5O54942 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cldn5O54942 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cldn5O54942 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm23294-201ENSMUST00000104150 164 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.75□□□□□ -1.49
Cldn5O54942 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm14871-201ENSMUST00000119056 194 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm25430-201ENSMUST00000157614 289 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Gm26086-201ENSMUST00000157902 263 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Gm22420-201ENSMUST00000178795 126 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm28017-201ENSMUST00000183434 126 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Gm21654-201ENSMUST00000188086 691 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Gm38185-201ENSMUST00000193195 694 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Gm44690-201ENSMUST00000207984 382 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cldn5O54942 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cldn5O54942 Mir449a-201ENSMUST00000083641 91 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cldn5O54942 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.75□□□□□ -1.49
Cldn5O54942 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cldn5O54942 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Cldn5O54942 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.74□□□□□ -1.49
Cldn5O54942 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cldn5O54942 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn5O54942 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.74□□□□□ -1.49
Cldn5O54942 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.74□□□□□ -1.49
Cldn5O54942 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cldn5O54942 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn5O54942 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn5O54942 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn5O54942 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn5O54942 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.74□□□□□ -1.49
Cldn5O54942 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cldn5O54942 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.74□□□□□ -1.49
Cldn5O54942 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cldn5O54942 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cldn5O54942 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Cldn5O54942 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms