Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm4853-201ENSMUST00000119359 394 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm14489-201ENSMUST00000120868 901 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm12494-201ENSMUST00000121684 521 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm12438-201ENSMUST00000122034 336 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm7973-201ENSMUST00000122107 488 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmgb3O54879 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm4152-201ENSMUST00000172675 259 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm8941-201ENSMUST00000181451 899 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Mir6412-201ENSMUST00000184477 97 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm5260-201ENSMUST00000186157 949 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm37809-201ENSMUST00000195050 931 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm8479-201ENSMUST00000203825 718 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm44580-201ENSMUST00000206333 877 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm31166-201ENSMUST00000209326 288 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm38430-201ENSMUST00000209888 1240 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 AC165292.1-201ENSMUST00000215218 620 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm7802-201ENSMUST00000216464 262 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC4.38□□□□□ -1.71
Hmgb3O54879 AC126685.1-201ENSMUST00000221001 121 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hmgb3O54879 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm8256-203ENSMUST00000228692 591 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm23502-201ENSMUST00000083902 145 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm24032-201ENSMUST00000083932 159 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hmgb3O54879 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC4.38□□□□□ -1.71
Hmgb3O54879 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmgb3O54879 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Hmgb3O54879 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm7146-201ENSMUST00000116079 739 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm15034-201ENSMUST00000120043 349 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm6446-201ENSMUST00000120604 818 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm12413-201ENSMUST00000121508 312 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm26350-201ENSMUST00000157531 288 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm25439-201ENSMUST00000158280 131 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm9006-201ENSMUST00000165520 841 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm20545-201ENSMUST00000174739 210 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm8919-201ENSMUST00000182028 1014 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm29474-201ENSMUST00000187688 379 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hmgb3O54879 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm2979-201ENSMUST00000193442 463 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm6631-201ENSMUST00000193699 559 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm20940-201ENSMUST00000197308 360 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC4.37□□□□□ -1.71
Hmgb3O54879 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.37□□□□□ -1.71
Hmgb3O54879 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms