Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Gm12422-201ENSMUST00000121431 302 ntBASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Gm23513-201ENSMUST00000158181 133 ntBASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Igkv12-47-201ENSMUST00000196961 356 ntBASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc180J3QNE4 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Gm44668-201ENSMUST00000207911 3265 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Gm2367-201ENSMUST00000192374 472 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Gm42542-201ENSMUST00000197978 268 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Gm46191-201ENSMUST00000218899 433 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 AC154576.2-203ENSMUST00000224736 253 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 CT025525.4-201ENSMUST00000227728 277 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 AC155167.2-201ENSMUST00000226127 1945 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 AC122382.2-201ENSMUST00000225128 3602 ntBASIC9.98□□□□□ -0.81
Ccdc180J3QNE4 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Gm22725-201ENSMUST00000158092 110 ntBASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Gm43750-201ENSMUST00000199027 2493 ntBASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccdc180J3QNE4 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Gm23534-201ENSMUST00000157539 97 ntBASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Gm44673-201ENSMUST00000205692 996 ntBASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccdc180J3QNE4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 AC122024.1-201ENSMUST00000219276 4850 ntBASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm12317-201ENSMUST00000122307 319 ntBASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Mir1946b-201ENSMUST00000157853 133 ntBASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm7333-201ENSMUST00000213449 1060 ntBASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccdc180J3QNE4 Gm42686-201ENSMUST00000199172 4108 ntBASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Gm15480-201ENSMUST00000120442 519 ntBASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Gm42640-201ENSMUST00000199792 1195 ntBASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 AC123067.1-201ENSMUST00000217711 462 ntBASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 AC153553.1-201ENSMUST00000218257 684 ntBASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccdc180J3QNE4 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms