Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm28812-201ENSMUST00000185963 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29468-201ENSMUST00000185978 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28854-201ENSMUST00000186218 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28636-201ENSMUST00000186353 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28452-201ENSMUST00000186623 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29298-201ENSMUST00000186704 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28227-201ENSMUST00000186862 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28796-201ENSMUST00000186905 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28473-201ENSMUST00000187325 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28949-201ENSMUST00000187805 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28773-201ENSMUST00000187925 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29422-201ENSMUST00000188062 694 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28787-201ENSMUST00000188357 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29451-201ENSMUST00000188862 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29033-201ENSMUST00000189114 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29614-201ENSMUST00000189263 694 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28751-201ENSMUST00000189287 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29559-201ENSMUST00000189412 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28272-201ENSMUST00000189512 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28483-201ENSMUST00000189519 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28123-201ENSMUST00000189725 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28368-201ENSMUST00000189804 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29119-201ENSMUST00000189973 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28716-201ENSMUST00000190217 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29239-201ENSMUST00000190304 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28837-201ENSMUST00000190397 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28531-201ENSMUST00000190529 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28165-201ENSMUST00000190669 694 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm32347-201ENSMUST00000192944 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm37990-201ENSMUST00000195821 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm18340-201ENSMUST00000196342 609 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm17849-201ENSMUST00000219788 853 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm4057-201ENSMUST00000221407 368 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 AC124746.1-201ENSMUST00000227535 1300 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm11260-201ENSMUST00000121163 942 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm5383-201ENSMUST00000121177 617 ntBASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdh1F7BJK1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms