Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Mir466i-201ENSMUST00000116924 121 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm14930-201ENSMUST00000118864 652 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm15400-201ENSMUST00000118944 601 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm15660-201ENSMUST00000118997 478 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm8545-201ENSMUST00000120692 801 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm14876-201ENSMUST00000120795 327 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm15877-201ENSMUST00000121897 964 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm23539-201ENSMUST00000157537 224 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm24236-201ENSMUST00000157794 134 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm23225-201ENSMUST00000158121 114 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Mir6911-201ENSMUST00000184241 69 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm37716-201ENSMUST00000193553 947 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm43382-201ENSMUST00000198954 838 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm19060-201ENSMUST00000201959 421 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm44134-202ENSMUST00000204777 545 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm18329-201ENSMUST00000215832 589 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm6104-201ENSMUST00000078030 603 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm12731-201ENSMUST00000120932 268 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm23964-201ENSMUST00000157966 107 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm22650-201ENSMUST00000175138 105 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm38131-201ENSMUST00000192449 430 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm37187-201ENSMUST00000193425 341 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm8672-201ENSMUST00000221200 332 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm7042-201ENSMUST00000223027 384 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 AC132260.2-201ENSMUST00000224482 344 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Trim3Q9R1R2 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.26□□□□□ -1.57
Trim3Q9R1R2 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.26□□□□□ -1.57
Trim3Q9R1R2 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms