Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm13077-201ENSMUST00000121941 484 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm12488-201ENSMUST00000122449 499 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm26106-201ENSMUST00000157254 228 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm25861-201ENSMUST00000158251 109 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm23872-201ENSMUST00000175432 77 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Mir7674-201ENSMUST00000184964 63 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm6366-201ENSMUST00000198766 826 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm20946-201ENSMUST00000212367 461 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm24032-201ENSMUST00000083932 159 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rnf4Q9QZS2 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm11271-201ENSMUST00000116054 440 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm16074-201ENSMUST00000119524 444 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm25826-201ENSMUST00000157090 137 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm3076-201ENSMUST00000161613 451 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm21399-201ENSMUST00000180210 597 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm27210-201ENSMUST00000184263 402 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm27148-201ENSMUST00000185086 160 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm5260-201ENSMUST00000186157 949 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm18444-201ENSMUST00000191239 629 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm37659-201ENSMUST00000194574 111 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm35013-201ENSMUST00000197218 832 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm9057-201ENSMUST00000198791 296 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm33178-201ENSMUST00000212090 257 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 AV026068-237ENSMUST00000226075 572 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Gm10705-201ENSMUST00000098980 461 ntBASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Rnf4Q9QZS2 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.65□□□□□ -1.51
Rnf4Q9QZS2 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Rnf4Q9QZS2 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms