Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm14116-201ENSMUST00000117733 805 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm16511-201ENSMUST00000120019 564 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm13484-201ENSMUST00000120738 412 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm6977-201ENSMUST00000121568 512 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm15164-201ENSMUST00000122203 271 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm12929-201ENSMUST00000122406 370 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm25487-201ENSMUST00000158725 125 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm8550-201ENSMUST00000161621 653 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm21877-201ENSMUST00000185640 694 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm28655-201ENSMUST00000191538 692 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm8861-201ENSMUST00000196346 832 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm43493-201ENSMUST00000199837 202 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm18252-203ENSMUST00000215855 757 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm46364-201ENSMUST00000218548 319 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm4822-201ENSMUST00000077551 479 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sec61a2Q9JLR1 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Rnu11-201ENSMUST00000104135 134 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm26422-201ENSMUST00000104276 132 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm13469-201ENSMUST00000118231 350 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm11976-201ENSMUST00000119236 295 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm12734-201ENSMUST00000120228 948 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm16463-201ENSMUST00000120527 721 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm11472-201ENSMUST00000121305 556 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm8722-201ENSMUST00000121466 769 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm13194-201ENSMUST00000142299 311 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Mir1953-201ENSMUST00000157866 89 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm25981-201ENSMUST00000157921 295 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm18808-201ENSMUST00000173316 462 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Gm25675-201ENSMUST00000174979 118 ntBASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sec61a2Q9JLR1 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms