Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm13681-201ENSMUST00000117925 210 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm23207-201ENSMUST00000158665 102 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm37203-201ENSMUST00000191618 385 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm38360-201ENSMUST00000195130 454 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm44074-201ENSMUST00000204562 337 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cpne8Q9DC53 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm4660-201ENSMUST00000131499 403 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm10087-201ENSMUST00000167650 330 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm2429-201ENSMUST00000194635 586 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm44412-201ENSMUST00000203018 294 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.6□□□□□ -1.51
Cpne8Q9DC53 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm12244-201ENSMUST00000119500 291 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm12413-201ENSMUST00000121508 312 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm25489-201ENSMUST00000158727 141 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm16112-201ENSMUST00000159075 382 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm17223-201ENSMUST00000171413 481 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm17511-201ENSMUST00000172206 342 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm5946-201ENSMUST00000182340 970 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm8826-201ENSMUST00000193161 948 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm37187-201ENSMUST00000193425 341 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cpne8Q9DC53 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.59□□□□□ -1.52
Cpne8Q9DC53 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Cpne8Q9DC53 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cpne8Q9DC53 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Cpne8Q9DC53 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cpne8Q9DC53 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms