Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm38670-201ENSMUST00000199248 77 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm45185-201ENSMUST00000207556 404 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm33601-201ENSMUST00000210001 961 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm18705-201ENSMUST00000215985 913 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cdc40Q9DC48 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm11761-201ENSMUST00000121392 445 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Mir3110-201ENSMUST00000175053 80 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm22993-201ENSMUST00000175423 254 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm22852-201ENSMUST00000177899 101 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm27679-201ENSMUST00000184612 84 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm37681-201ENSMUST00000193880 727 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm42646-201ENSMUST00000202233 914 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm45525-201ENSMUST00000210800 389 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm6776-201ENSMUST00000057752 900 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Mir133b-201ENSMUST00000083546 119 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdc40Q9DC48 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms