Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm27033-201ENSMUST00000183226 544 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm21803-201ENSMUST00000188897 693 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm28567-201ENSMUST00000190270 693 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm37044-201ENSMUST00000193531 693 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm38369-201ENSMUST00000195101 693 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm43315-201ENSMUST00000198120 313 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm36378-201ENSMUST00000201709 388 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm44773-201ENSMUST00000207374 557 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm18598-201ENSMUST00000207724 597 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm33312-201ENSMUST00000222443 332 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 CT009733.1-201ENSMUST00000225322 425 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ddx56Q9D0R4 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm26146-201ENSMUST00000104478 185 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm12713-201ENSMUST00000118404 764 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm2003-201ENSMUST00000118537 636 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm13493-201ENSMUST00000120318 493 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm12308-201ENSMUST00000120440 389 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm12396-201ENSMUST00000121600 306 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm1989-201ENSMUST00000126244 636 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm6081-201ENSMUST00000134472 489 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm25219-201ENSMUST00000157545 330 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm25557-201ENSMUST00000158084 315 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm22428-201ENSMUST00000158554 132 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm5430-201ENSMUST00000182525 915 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm18553-201ENSMUST00000194152 634 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm36985-201ENSMUST00000195595 379 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm45070-201ENSMUST00000208100 246 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm45551-201ENSMUST00000211459 928 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm10095-201ENSMUST00000222765 483 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm5229-201ENSMUST00000039375 354 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.39□□□□□ -1.39
Ddx56Q9D0R4 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Snora35-201ENSMUST00000104579 128 ntBASIC6.38□□□□□ -1.39
Ddx56Q9D0R4 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms