Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm9985-201ENSMUST00000044101 510 ntBASIC7.39□□□□□ -1.23
Trim11Q99PQ2 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Gm26064-201ENSMUST00000083381 109 ntBASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Gm24765-201ENSMUST00000083691 103 ntBASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Robo2-210ENSMUST00000226478 8059 ntBASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Trim11Q99PQ2 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm22710-201ENSMUST00000116892 125 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm12937-201ENSMUST00000118333 448 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm12778-201ENSMUST00000122341 333 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm13602-201ENSMUST00000122405 493 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm23229-201ENSMUST00000157297 105 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm26321-201ENSMUST00000157740 242 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm23027-201ENSMUST00000158771 158 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm20561-201ENSMUST00000188131 292 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm28779-201ENSMUST00000189678 323 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm28190-201ENSMUST00000189766 722 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm37103-201ENSMUST00000191830 115 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm4574-201ENSMUST00000207804 542 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 AC124356.2-201ENSMUST00000221874 336 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.38□□□□□ -1.23
Trim11Q99PQ2 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm25396-201ENSMUST00000103981 133 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm11859-201ENSMUST00000118099 455 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm15390-201ENSMUST00000120323 738 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm12535-201ENSMUST00000121025 484 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm3810-201ENSMUST00000122413 476 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm24385-201ENSMUST00000122694 350 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Gm25553-201ENSMUST00000158076 79 ntBASIC7.37□□□□□ -1.23
Trim11Q99PQ2 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms