Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Rnu11-201ENSMUST00000104135 134 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm24340-201ENSMUST00000104208 97 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm24888-201ENSMUST00000104387 130 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm14229-201ENSMUST00000121178 850 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm12175-201ENSMUST00000122081 345 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm6081-201ENSMUST00000134472 489 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm12504-202ENSMUST00000148026 306 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm24359-201ENSMUST00000158418 221 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm24925-201ENSMUST00000178157 107 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm27155-201ENSMUST00000183716 898 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm27853-201ENSMUST00000184176 250 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm29534-201ENSMUST00000187328 382 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm37770-201ENSMUST00000192855 772 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm9504-201ENSMUST00000196322 468 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm31306-201ENSMUST00000197517 508 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm29781-201ENSMUST00000203862 478 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm44138-201ENSMUST00000204939 271 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm5027-201ENSMUST00000206700 375 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm6436-201ENSMUST00000077163 451 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.06□□□□□ -1.44
Trim8Q99PJ2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm35755-201ENSMUST00000222392 2077 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm25647-201ENSMUST00000101832 78 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm25823-201ENSMUST00000101995 78 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm12939-201ENSMUST00000117303 165 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm14382-201ENSMUST00000117374 437 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm11358-201ENSMUST00000122310 373 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm7613-201ENSMUST00000139070 487 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm16558-201ENSMUST00000163015 532 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm24220-201ENSMUST00000177753 79 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm25988-201ENSMUST00000177759 79 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm23471-201ENSMUST00000177886 79 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm26488-201ENSMUST00000178225 79 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm23449-201ENSMUST00000179208 79 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Gm25221-201ENSMUST00000180051 79 ntBASIC6.05□□□□□ -1.44
Trim8Q99PJ2 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms