Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm5436-201ENSMUST00000058103 643 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Mir30b-201ENSMUST00000083542 96 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Robo2-210ENSMUST00000226478 8059 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm15780-201ENSMUST00000121283 935 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm11990-201ENSMUST00000121505 897 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm11349-201ENSMUST00000122209 1116 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm26371-201ENSMUST00000157829 104 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm10319-202ENSMUST00000159439 846 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm3489-201ENSMUST00000190083 528 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm44048-201ENSMUST00000204531 361 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 AC154527.3-201ENSMUST00000225519 989 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Syne4Q8CII8 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne4Q8CII8 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.53□□□□□ -1.36
Syne4Q8CII8 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Syne4Q8CII8 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Syne4Q8CII8 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Syne4Q8CII8 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Syne4Q8CII8 Gm22499-201ENSMUST00000104501 135 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 Gm15560-201ENSMUST00000117107 643 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 Gm15741-201ENSMUST00000119401 754 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Syne4Q8CII8 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Syne4Q8CII8 Gm11805-201ENSMUST00000121238 600 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 Gm15428-201ENSMUST00000121352 333 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.52□□□□□ -1.37
Syne4Q8CII8 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms