Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm22596-201ENSMUST00000157601 316 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm22916-201ENSMUST00000157616 119 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm38015-201ENSMUST00000193048 188 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm37490-201ENSMUST00000195566 724 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm7733-201ENSMUST00000199038 919 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm4374-201ENSMUST00000204929 424 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm45722-201ENSMUST00000213075 466 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm18705-201ENSMUST00000215985 913 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm7042-201ENSMUST00000223027 384 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Nup88Q8CEC0 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm26300-201ENSMUST00000102282 94 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm15877-201ENSMUST00000121897 964 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm22106-201ENSMUST00000122544 127 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm26489-201ENSMUST00000157880 264 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm9006-201ENSMUST00000165520 841 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm8032-201ENSMUST00000171009 574 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm19124-201ENSMUST00000191041 832 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm8039-201ENSMUST00000204758 712 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm9278-201ENSMUST00000205508 553 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm31166-201ENSMUST00000209326 288 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm25682-201ENSMUST00000083942 164 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nup88Q8CEC0 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Nup88Q8CEC0 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm13771-201ENSMUST00000117988 238 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm24685-201ENSMUST00000157764 285 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm24216-201ENSMUST00000158259 117 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm29161-201ENSMUST00000188250 699 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.52□□□□□ -1.37
Nup88Q8CEC0 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.52□□□□□ -1.37
Nup88Q8CEC0 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms