Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm15186-201ENSMUST00000119345 563 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm24692-201ENSMUST00000157761 146 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm28567-201ENSMUST00000190270 693 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm37044-201ENSMUST00000193531 693 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm38291-201ENSMUST00000193671 259 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm37336-202ENSMUST00000193705 468 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm38369-201ENSMUST00000195101 693 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Gm29736-201ENSMUST00000198189 385 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a6Q8C6K9 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm14563-201ENSMUST00000120571 354 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm44243-201ENSMUST00000204323 692 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 AC132317.2-201ENSMUST00000227301 519 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 AC158938.1-201ENSMUST00000225372 6720 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm43488-201ENSMUST00000198874 2504 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 AC114585.1-201ENSMUST00000228080 3680 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm37254-201ENSMUST00000193542 3901 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm25564-201ENSMUST00000104604 132 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm25293-201ENSMUST00000122792 285 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm26486-201ENSMUST00000158021 110 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Col6a6Q8C6K9 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm19029-201ENSMUST00000189923 564 ntBASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm37884-201ENSMUST00000191857 818 ntBASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm17952-201ENSMUST00000193914 747 ntBASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm17994-201ENSMUST00000209260 533 ntBASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm23795-201ENSMUST00000084006 137 ntBASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Col6a6Q8C6K9 Gm14802-201ENSMUST00000121944 1885 ntBASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm11987-201ENSMUST00000118524 381 ntBASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm13363-201ENSMUST00000122008 522 ntBASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms