Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm29156-201ENSMUST00000187764 499 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Ighv1-3-201ENSMUST00000192764 302 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm20128-201ENSMUST00000196189 417 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm44952-201ENSMUST00000204443 433 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm8168-201ENSMUST00000209631 948 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm36247-201ENSMUST00000211834 285 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm7692-201ENSMUST00000213534 409 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC160114.1-201ENSMUST00000221930 365 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm9315-201ENSMUST00000222696 908 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC154506.1-201ENSMUST00000225178 621 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim47Q8C0E3 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm7146-201ENSMUST00000116079 739 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm13593-201ENSMUST00000121329 692 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm13471-201ENSMUST00000122057 433 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm12929-201ENSMUST00000122406 370 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm25909-201ENSMUST00000157619 121 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm24853-201ENSMUST00000158026 121 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm23810-201ENSMUST00000175150 74 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm20648-201ENSMUST00000175815 328 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Mir7669-201ENSMUST00000183442 58 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm43652-201ENSMUST00000196219 675 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm43089-201ENSMUST00000199162 275 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm44060-201ENSMUST00000204440 410 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 CT030030.1-201ENSMUST00000218809 152 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm25004-201ENSMUST00000083811 161 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms