Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm26350-201ENSMUST00000157531 288 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm23030-201ENSMUST00000158004 273 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm25363-201ENSMUST00000158850 245 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm7152-201ENSMUST00000163570 605 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm8241-201ENSMUST00000189286 816 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm29376-201ENSMUST00000189357 835 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm4322-201ENSMUST00000191094 336 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm38131-201ENSMUST00000192449 430 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm8826-201ENSMUST00000193161 948 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm9317-201ENSMUST00000197055 862 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm2961-201ENSMUST00000211074 772 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm8672-201ENSMUST00000221200 332 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trub1Q8C0D0 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm11278-201ENSMUST00000121002 997 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm24477-201ENSMUST00000157438 103 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm25430-201ENSMUST00000157614 289 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm16125-201ENSMUST00000159003 339 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm6808-201ENSMUST00000162341 807 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm19029-201ENSMUST00000189923 564 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm37187-201ENSMUST00000193425 341 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm44074-201ENSMUST00000204562 337 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm45734-201ENSMUST00000211916 411 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms