Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col16a1Q8BLX7 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col16a1Q8BLX7 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm22266-201ENSMUST00000104011 138 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm12422-201ENSMUST00000121431 302 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm23534-201ENSMUST00000157539 97 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Gm2367-201ENSMUST00000192374 472 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Prl7a1-203ENSMUST00000224852 1283 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 CT025686.1-201ENSMUST00000227592 438 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col16a1Q8BLX7 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm24469-201ENSMUST00000104487 131 ntBASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm12328-201ENSMUST00000118611 197 ntBASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm7721-201ENSMUST00000200446 546 ntBASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 AC122382.2-201ENSMUST00000225128 3602 ntBASIC7.14□□□□□ -1.27
Col16a1Q8BLX7 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm11369-201ENSMUST00000120812 318 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm29489-201ENSMUST00000188934 324 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm37973-201ENSMUST00000195767 1289 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Trav3-2-201ENSMUST00000198999 305 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm22220-201ENSMUST00000082671 149 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms